Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015883349.1_cds_XP_016438444.1_34105
CDS Infomation

[gene=LOC107764399] [db_xref=GeneID:107764399] [protein=phosphatidylinositol 4-phosphate 5-kinase 7-like] [protein_id=XP_016438444.1] [location=complement(join(497..776,1937..2105,4380..4534,6641..6706,6747..6868,6958..7068,8096..8261,8790..8957,9050..10114,10240..10256))] [gbkey=CDS]
Sequence

ATGGAGGACAGTGGAAGCATTACTGAAAAAGTCTTCTCAAATGGAGATGCTTATGGGGGT
AGTTTCAAGGGGATTCTTCCTCATGGAAAAGGTAAATATACTTGGTCAGATGGATCCGTT
TATGATGGTTGTTGGGAAGAAGGAAAAATGACTGGAGAAGGATGGCTTATTTGGCCTTCT
GGAGCTTCATATGAGGGTGATTTCTCTGGAGGTTACCTCCATGGTTTTGGAATATTTAAT
GGGTCTGATGGCTCAATATACAGAGGTGTTTGGAGAATGAATACCCAGCATGGGATAGGA
AGAAAACAGTATCAGAATTCTGATGTTTATGATGGTTGTTGGAAAGAGGGAGTACGTGAA
GGCAGCGGTCGATATGCATGGAGTAATGGAAACATGTATATTGGGAACTGGAAAGATGGA
AAAATGTGTGGTAGAGGTGTTATGAAATGGTTTGATGGAGATCTTTTTGATGGATTTTGG
TTGAATGGTTTAAGACATGGGTCAGGCTGTTACCGATTTGCAGATGGAAGTTACTACTTT
GGGGTGTGGACTAAAGGGCTAAAAGATGGACTTGGAATGTTTTATCCTGCTGGAAGTAAG
CATCGCTTTCTGAGGAAGACCAGTGATAGGCATGATCAGAAGAGGAAAAAGCAGCTCTCA
CATACTTCATCAACTATTTCAGAGTCTGTGAAACCGAAAGTGAACCGTAGTATTTCGGAG
AGATTCTCCTATAGTTTGCTGAAAGGCTCAGGGAGCATATCACTGAGGACTACATCACAG
GGAGAAGACGTTGCCCTTGATGATTCCAGCAGAGACATGTTGGCCTGTGATTCATCAAGT
GTATTATCTCAAAGCTCTGATGACAAAAGCGATTTTCTGGAAACTGGTTCTGTGGCATAT
GAAAGAGAATACACGCAAGGAGTCCTAATCAAAGAAAGGATTATAAATATTAGTAGGCTA
TCTCGCAAAAGTAAACAACGGATTAAGTTTCACGCAAAAGAAGTAAAAAGGAGGTCATGT
GTGTACTTTCTAGAAGGCCGTAAGAGCTACTATCTGATGCTTAATTTGCAACTTGGTATC
AGGTATTCTGTTGGCAAGATCACTCCTGTGCCTATCCGTGAAGTGAGACAGTCAGATTTT
GGAGATCAAGCTAGAATTAAAATGTACTTTCCCAGGAAGGGTTCCCAATTTACACCTTCA
CATCATTCCATCGATTTTTATTGGAAGGACTATTGCCCTATGGTTTTCAGATATTTGAGA
GAGTTGTTCAAGCTGGATGCGGCAGAGTATATGATGTCCATATGTGGTGATGATGGTCTG
AGAGAGCTTTCGTCTCCTGGAAAGAGTGGCAGCCTTTTCTATCTTTCTCGGGATGATAGA
TTTGTGATCAAGACGTTAAAGAAGTCTGAGCTCAAGGTTCTACTCAAGATGCTTCCTGAT
TACTATAGACATGTAAAGGAACATGACAACACACTCATAACAAAAGTTTTTGGGCTGCAC
AGGATATCATTGAAACGTGGAAAAAAGGTACGCTTTGTAGTCATGGGGAATATGTTTTGT
ACGGAATTAAGAATACATCGCCGTTATGATTTGAAAGGTTCTTCTCATGGGAGATTTACA
AAGAAAGATCGTATTGATGAGACGACGACATTAAAAGACCTCGATTTGAAATATGAGTTT
CATATGGACAAGTTATTACGTGAGGCACTTTTCAAACAATTATCTTTGGACTGCAGATTT
TTAGAATCTCAGAACATTATAGACTATAGCCTTCTATTGGGGTTACATTTTAGAGCTCCT
GAGAATCTGATATCTCTTTTACAGCCACCTGATTCTCAAAACAATGTAGAAACTAATCCT
GAGCATGAAGGTGGGATATTTCAGGGGGAGCTCTCAATTCCACCAAGGGGTTTGATTTTG
GTAACTCATGAACCCAGTTCTGTCAGCACTACACCAGGTCCTCATATAAGAGGAAGTACT
CTGAGAGCCATGTCCGTTGGTGACAAGGAGGTTGATCTTCTTGTCCCGGGTACTGGAAGG
TTAAGGGTACAATTAGGTGTAAACATGCCAGCCCAAGCAAACCAAAAACTCATGCAGGAT
GAGGCAGCTTCAGTACAAGTTGAACTTTTTGAGGTATATGATGTTGTTCTATATCTCGGA
ATAATTGATATACTGCAGGAATACAACATGAAAAAGAAATTGGAGCATACCTACAAATCG
TTGCAATTTGATCCTATGTCGGTCTCTGTAATTGAACCCAAGCTTTACTCGAAACGTTTC
ATCAATTTCTTGGAGAAAGTGTTCCCCGTTGAGCCATGA

Peptide Sequence

PEP ID

XP_016438444.1
PEP Infomation

PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 7-like [Nicotiana tabacum]
Sequence

MEDSGSITEKVFSNGDAYGGSFKGILPHGKGKYTWSDGSVYDGCWEEGKMTGEGWLIWPS
GASYEGDFSGGYLHGFGIFNGSDGSIYRGVWRMNTQHGIGRKQYQNSDVYDGCWKEGVRE
GSGRYAWSNGNMYIGNWKDGKMCGRGVMKWFDGDLFDGFWLNGLRHGSGCYRFADGSYYF
GVWTKGLKDGLGMFYPAGSKHRFLRKTSDRHDQKRKKQLSHTSSTISESVKPKVNRSISE
RFSYSLLKGSGSISLRTTSQGEDVALDDSSRDMLACDSSSVLSQSSDDKSDFLETGSVAY
EREYTQGVLIKERIINISRLSRKSKQRIKFHAKEVKRRSCVYFLEGRKSYYLMLNLQLGI
RYSVGKITPVPIREVRQSDFGDQARIKMYFPRKGSQFTPSHHSIDFYWKDYCPMVFRYLR
ELFKLDAAEYMMSICGDDGLRELSSPGKSGSLFYLSRDDRFVIKTLKKSELKVLLKMLPD
YYRHVKEHDNTLITKVFGLHRISLKRGKKVRFVVMGNMFCTELRIHRRYDLKGSSHGRFT
KKDRIDETTTLKDLDLKYEFHMDKLLREALFKQLSLDCRFLESQNIIDYSLLLGLHFRAP
ENLISLLQPPDSQNNVETNPEHEGGIFQGELSIPPRGLILVTHEPSSVSTTPGPHIRGST
LRAMSVGDKEVDLLVPGTGRLRVQLGVNMPAQANQKLMQDEAASVQVELFEVYDVVLYLG
IIDILQEYNMKKKLEHTYKSLQFDPMSVSVIEPKLYSKRFINFLEKVFPVEP

Transcript Sequence

Gene sequence data has not been registered.